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Bachelor	TR-NQF-HE: Level 6	QF-EHEA: First Cycle	EQF-LLL: Level 6

Course Introduction and Application Information

Course Code	Course Name	Semester	Theoretical	Practical	Credit	ECTS
MBG4003	Comparative Genomics and Proteomics	Spring	2	0	2	5

This catalog is for information purposes. Course status is determined by the relevant department at the beginning of semester.

Basic information

Language of instruction:	English
Type of course:	Non-Departmental Elective
Course Level:	Bachelor’s Degree (First Cycle)
Mode of Delivery:	Face to face
Course Coordinator :	Assist. Prof. CEMALETTİN BEKPEN
Recommended Optional Program Components:	There is none.
Course Objectives:	The objective of this course is to provide information about the "omics" technology, especially focusing on genomics and proteomics. The recent applications of these areas and relevant bioinformatics background will be discussed.

Learning Outcomes

The students who have succeeded in this course;
1. Define the "omics" technologies.
2. Discuss the technologies behind genomics and proteomics studies.
3. Discuss the applications of both structural and functional genomics and also the proteomics studies.
4. Define basic information about bioinformatics.
5. Recognize the importance of these technologies in modern genetics.

Course Content

Computational, molecular and genetic methodologies are covered including applications in structural and functional genomics (genome analysis and comparative genomics, technologies for transcriptional profiling), proteomics and related bioinformatics.

Weekly Detailed Course Contents

Week	Subject	Related Preparation
1)	Introduction and definition of "omics" technology	Reading
2)	Genomics, MetaGenomics	Reading
3)	Functional Genomics	Reading
4)	Comparative Genomics	Reading
5)	Epigenomics	Reading
6)	PaleoGenomics	Reading
7)	Transcriptomics I	Reading
8)	Transcriptomics II	Reading
9)	Review for the midterm exam	Reading
10)	Introduction to Proteomics "What is Proteomics"	Reading
11)	Protein Separation and Sequencing	Reading
12)	Protein Purification	Reading
13)	Protein-Protein Interaction Y2H	Reading
14)	Targeted Single Cell Proteomics	Reading

Sources

Course Notes / Textbooks:	Ders notları haftalık olarak verilecektir. Course notes will be supplied weekly.
References:	1)Discovering genomics, proteomics and bioinformatics, Campbell AM and Heyer LJ, 2nd edition, 2007, Pearson education Inc., ISBN: 0-8053-8219-4 2)Bioinformatics and Functional genomics, Pevsner J, 2nd edition, 2009, John Wiley & Sons Inc., ISBN: 978-0-470-08585-1 3)Principles of gene manipulation and genomics, Primrose SB and Tywan RM, 7th edition, 2006, Blacwell Publishing, ISBN: 9781405135443"

Evaluation System

Semester Requirements	Number of Activities	Level of Contribution
Attendance	1	% 5
Quizzes	1	% 20
Midterms	1	% 25
Final	1	% 50
Total		% 100
PERCENTAGE OF SEMESTER WORK		% 50
PERCENTAGE OF FINAL WORK		% 50
Total		% 100

ECTS / Workload Table

Activities	Number of Activities	Duration (Hours)	Workload
Course Hours	14	2	28
Study Hours Out of Class	14	3	42
Homework Assignments	1	20	20
Quizzes	4	4	16
Midterms	1	2	2
Paper Submission	1	10	10
Final	1	2	2
Total Workload			120

Contribution of Learning Outcomes to Programme Outcomes

No Effect	1 Lowest	2 Low	3 Average	4 High	5 Highest

	Program Outcomes	Level of Contribution
1)	To prepare students to become communication professionals by focusing on strategic thinking, professional writing, ethical practices, and the innovative use of both traditional and new media	2
2)	To be able to explain and define problems related to the relationship between facts and phenomena in areas such as Advertising, Persuasive Communication, and Brand Management
3)	To critically discuss and interpret theories, concepts, methods, tools, and ideas in the field of advertising
4)	To be able to follow and interpret innovations in the field of advertising
5)	To demonstrate a scientific perspective in line with the topics they are curious about in the field.
6)	To address and solve the needs and problems of the field through the developed scientific perspective
7)	To recognize and understand all the dynamics within the field of advertising
8)	To analyze and develop solutions to problems encountered in the practical field of advertising