MBG2003 Computation for Biological Sciences IBahçeşehir UniversityDegree Programs BUSINESS ADMINISTRATION (TURKISH)General Information For StudentsDiploma SupplementErasmus Policy StatementNational QualificationsBologna Commission
BUSINESS ADMINISTRATION (TURKISH)
Associate TR-NQF-HE: Level 5 QF-EHEA: Short Cycle EQF-LLL: Level 5

Course Introduction and Application Information

Course Code Course Name Semester Theoretical Practical Credit ECTS
MBG2003 Computation for Biological Sciences I Spring
Fall
2 2 3 7
This catalog is for information purposes. Course status is determined by the relevant department at the beginning of semester.

Basic information

Language of instruction: English
Type of course: Non-Departmental Elective
Course Level: Associate (Short Cycle)
Mode of Delivery: Face to face
Course Coordinator : Dr. Öğr. Üyesi ELIZABETH HEMOND
Course Lecturer(s): Dr. Öğr. Üyesi SERKAN AYVAZ
Prof. Dr. SÜREYYA AKYÜZ
Course Objectives: This class intended to provide a general introduction to computational tools for biology.

Learning Outcomes

The students who have succeeded in this course;
1. Have learned important biological data sources.
2. Can evaluate the results of biological analysis statistically and mathematically.
3. Have learned how to use various tools to evaluate genome sequencing data.
4. Have learned basic level analyses in Matlab.

Course Content

Evaluation and analysis of general biological and genome sequencing data using related computational tools efficiently.

Weekly Detailed Course Contents

Week Subject Related Preparation
1) Biological data
2) Biyological databases
3) Sequencing data
4) Sequence alignment
5) Genome sequencing data
6) Genome assembly
7) Genetic variation analysis I
8) Genetic variation analysis II
9) Gene expression analysis
10) Microarray data analysis
11) Mass Spec analysis
12) Molecular modelling I
13) Molecular modelling II
14) Molecular modelling III

Sources

Course Notes / Textbooks: Ders notları verilecektir.
Course notes will be supplied.
References: Computational Biology Series Editors: Dress, A., Linial, M., Troyanskaya, O., Vingron, M. ISSN: 1568-2684, 2009

Evaluation System

Semester Requirements Number of Activities Level of Contribution
Attendance 10 % 10
Presentation 1 % 15
Midterms 1 % 25
Final 1 % 50
Total % 100
PERCENTAGE OF SEMESTER WORK % 50
PERCENTAGE OF FINAL WORK % 50
Total % 100

ECTS / Workload Table

Activities Number of Activities Duration (Hours) Workload
Course Hours 14 4 56
Study Hours Out of Class 14 7 98
Presentations / Seminar 5 4 20
Midterms 1 2 2
Final 1 2 2
Total Workload 178

Contribution of Learning Outcomes to Programme Outcomes

No Effect 1 Lowest 2 Low 3 Average 4 High 5 Highest
           
Program Outcomes Level of Contribution
1) He/she applies theoretical business management knowledge on business life.
2) He/she uses business management function and applies and follows new management technics.
3) He/she performs legal responsibilities of business, follows and applies legislation.
4) He/she can use information and communication tecnologies that necessary for their area, follows technological change and applies new technologies to business system.
5) He/she determines, analyses and solves problems that appear in vocational applications.
6) He/she manages business finance, analyses business financial situation, and solves financial problems.
7) He/she gains management skill by managing and enhanging human resource effectively in accordance with business aims.
8) He/she can understand production and marketing functions as a whole, applies new production and marketing techniques.
9) He/she calculates cost, makes entry, prepares and interprets financial statements.
10) He/she has vocational ethical value that market needs in qualified staff, can use Turkish effectively in writing and speaking communication; have proficiency in foreign language knowledge to making international correspond.
11) He/she follows and applies vocational current and economic developments in national and international area. 2